Difference between revisions of "SJ03921"
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(Created page with "Category:gene == Gene SJ08609 == * transcription-direction: ** negative * right-end-position: ** 811407 * left-end-position: ** 801281 * centisome-position: ** 93.2998...") |
(Created page with "Category:gene == Gene SJ21322 == * transcription-direction: ** positive * right-end-position: ** 29118 * left-end-position: ** 28216 * centisome-position: ** 4.698962...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21322 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 29118 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 28216 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 4.698962 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[HBNOm]] |
| − | {{#set: right-end-position= | + | ** Category: [[orthology]] |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RETINOL-DEHYDROGENASE-RXN]] |
| − | {{#set: organism associated=S. | + | ** Category: [[annotation]] |
| − | {{#set: nb reaction associated= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | * [[RXN-12581]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-17728]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY66-368]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY66-367]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY66-380]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6872]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7782]] | ||
| + | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=29118}} | ||
| + | {{#set: left-end-position=28216}} | ||
| + | {{#set: centisome-position=4.698962 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=7}} | ||
| + | {{#set: nb pathway associated=5}} | ||
Revision as of 14:53, 5 January 2021
Contents
Gene SJ21322
- transcription-direction:
- positive
- right-end-position:
- 29118
- left-end-position:
- 28216
- centisome-position:
- 4.698962
Organism(s) associated with this gene
Reaction(s) associated
- 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- ESTRADIOL-17-BETA-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HBNOm
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RETINOL-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12581
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17728
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-368
- 2 reactions found over 3 reactions in the full pathway
- PWY66-367
- 4 reactions found over 5 reactions in the full pathway
- PWY66-380
- 1 reactions found over 4 reactions in the full pathway
- PWY-6872
- 1 reactions found over 4 reactions in the full pathway
- PWY-7782
- 11 reactions found over 16 reactions in the full pathway
