Difference between revisions of "SJ03939"
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(Created page with "Category:gene == Gene SJ04991 == * transcription-direction: ** negative * right-end-position: ** 796588 * left-end-position: ** 778941 * centisome-position: ** 80.66628...") |
(Created page with "Category:gene == Gene SJ03939 == * transcription-direction: ** positive * right-end-position: ** 48715 * left-end-position: ** 39136 * centisome-position: ** 34.216072...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ03939 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 48715 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 39136 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 34.216072 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLUTAMINESYN-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-381]] |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-5675]] |
| − | {{#set: right-end-position= | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6549]] |
| − | {{#set: centisome-position= | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| + | * [[PWY490-3]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[GLNSYN-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-6964]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6963]] | ||
| + | ** '''4''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=48715}} | ||
| + | {{#set: left-end-position=39136}} | ||
| + | {{#set: centisome-position=34.216072 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ03939
- transcription-direction:
- positive
- right-end-position:
- 48715
- left-end-position:
- 39136
- centisome-position:
- 34.216072
Organism(s) associated with this gene
Reaction(s) associated
- GLUTAMINESYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-381
- 3 reactions found over 3 reactions in the full pathway
- PWY-5675
- 4 reactions found over 4 reactions in the full pathway
- PWY-6549
- 8 reactions found over 9 reactions in the full pathway
- PWY490-3
- 3 reactions found over 4 reactions in the full pathway
- GLNSYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-6964
- 2 reactions found over 2 reactions in the full pathway
- PWY-6963
- 4 reactions found over 2 reactions in the full pathway
