Difference between revisions of "SJ03965"

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(Created page with "Category:gene == Gene SJ01489 == * transcription-direction: ** positive * right-end-position: ** 27496 * left-end-position: ** 18833 * centisome-position: ** 3.4197302...")
(Created page with "Category:gene == Gene SJ05433 == * transcription-direction: ** negative * right-end-position: ** 319235 * left-end-position: ** 308182 * centisome-position: ** 62.124325...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01489 ==
+
== Gene SJ05433 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 27496
+
** 319235
 
* left-end-position:
 
* left-end-position:
−
** 18833
+
** 308182
 
* centisome-position:
 
* centisome-position:
−
** 3.4197302    
+
** 62.124325    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4.2.99.18-RXN]]
+
* [[GLUCONOLACT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-2601]]
+
* [[RXN-8783]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
== Pathway(s) associated ==
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[GLUCOSE1PMETAB-PWY]]
−
{{#set: transcription-direction=positive}}
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: right-end-position=27496}}
+
* [[DHGLUCONATE-PYR-CAT-PWY]]
−
{{#set: left-end-position=18833}}
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
{{#set: centisome-position=3.4197302   }}
+
* [[PWY-2221]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[NPGLUCAT-PWY]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5530]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7165]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY3DJ-35471]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=319235}}
 +
{{#set: left-end-position=308182}}
 +
{{#set: centisome-position=62.124325   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=7}}

Revision as of 20:28, 18 December 2020

Gene SJ05433

  • transcription-direction:
    • negative
  • right-end-position:
    • 319235
  • left-end-position:
    • 308182
  • centisome-position:
    • 62.124325

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • DHGLUCONATE-PYR-CAT-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • NPGLUCAT-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5530
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7165
    • 1 reactions found over 7 reactions in the full pathway
  • PWY3DJ-35471
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03965&oldid=44810"