Difference between revisions of "SJ03966"

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(Created page with "Category:gene == Gene SJ04558 == * transcription-direction: ** negative * right-end-position: ** 14237 * left-end-position: ** 12563 * centisome-position: ** 11.895654...")
(Created page with "Category:gene == Gene SJ03966 == * transcription-direction: ** negative * right-end-position: ** 70482 * left-end-position: ** 60165 * centisome-position: ** 52.68896...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04558 ==
+
== Gene SJ03966 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 14237
+
** 70482
 
* left-end-position:
 
* left-end-position:
** 12563
+
** 60165
 
* centisome-position:
 
* centisome-position:
** 11.895654    
+
** 52.68896    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
* [[3.2.1.21-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[3.2.1.23-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[3.2.1.38-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[3.2.1.58-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[BETA-L-ARABINOSIDASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[BETAGALACTOSID-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[KETOLACTOSE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10769]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10773]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12398]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12399]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12400]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13602]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13603]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14179]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-5341]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8036]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-9674]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[BGALACT-PWY]]
+
* [[PWY-6164]]
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[LACTOSEUTIL-PWY]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6788]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6807]]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7091]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7092]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-3121]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5176]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6002]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=14237}}
+
{{#set: right-end-position=70482}}
{{#set: left-end-position=12563}}
+
{{#set: left-end-position=60165}}
{{#set: centisome-position=11.895654   }}
+
{{#set: centisome-position=52.68896   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=18}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:01, 18 March 2021

Gene SJ03966

  • transcription-direction:
    • negative
  • right-end-position:
    • 70482
  • left-end-position:
    • 60165
  • centisome-position:
    • 52.68896

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6164
    • 2 reactions found over 2 reactions in the full pathway