Difference between revisions of "SJ03978"

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(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...")
(Created page with "Category:gene == Gene SJ03978 == * transcription-direction: ** positive * right-end-position: ** 42812 * left-end-position: ** 28571 * centisome-position: ** 25.066017...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13526 ==
+
== Gene SJ03978 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 196015
+
** 42812
 
* left-end-position:
 
* left-end-position:
−
** 189101
+
** 28571
 
* centisome-position:
 
* centisome-position:
−
** 56.583523    
+
** 25.066017    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.4.19.12-RXN]]
−
* [[1.2.1.2-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=42812}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=28571}}
−
* [[KETOGLUTREDUCT-RXN]]
+
{{#set: centisome-position=25.066017   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PGLYCDEHYDROG-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16701]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-1881]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[P164-PWY]]
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-6696]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P162-PWY]]
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
−
* [[SERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=196015}}
 
−
{{#set: left-end-position=189101}}
 
−
{{#set: centisome-position=56.583523   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
 

Latest revision as of 11:02, 18 March 2021

Gene SJ03978

  • transcription-direction:
    • positive
  • right-end-position:
    • 42812
  • left-end-position:
    • 28571
  • centisome-position:
    • 25.066017

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03978&oldid=132651"