Difference between revisions of "SJ03989"
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(Created page with "Category:gene == Gene SJ22548 == * transcription-direction: ** positive * right-end-position: ** 139039 * left-end-position: ** 120966 * centisome-position: ** 69.77372...") |
(Created page with "Category:gene == Gene SJ19451 == * transcription-direction: ** negative * right-end-position: ** 112143 * left-end-position: ** 94848 * centisome-position: ** 41.795597...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19451 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 112143 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 94848 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 41.795597 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[2. | + | * [[3.2.1.14-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-12554]] |
| − | * [[RXN- | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-12623]] |
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | * [[RXN-12624]] |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| − | {{#set: organism associated=S. | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: nb reaction associated=3}} | + | == Pathway(s) associated == |
| + | * [[PWY-7822]] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6902]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6855]] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=112143}} | ||
| + | {{#set: left-end-position=94848}} | ||
| + | {{#set: centisome-position=41.795597 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=4}} | ||
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 14:50, 5 January 2021
Contents
Gene SJ19451
- transcription-direction:
- negative
- right-end-position:
- 112143
- left-end-position:
- 94848
- centisome-position:
- 41.795597
Organism(s) associated with this gene
Reaction(s) associated
- 3.2.1.14-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-12554
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12623
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12624
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7822
- 2 reactions found over 7 reactions in the full pathway
- PWY-6902
- 3 reactions found over 5 reactions in the full pathway
- PWY-6855
- 1 reactions found over 7 reactions in the full pathway
