Difference between revisions of "SJ04021"

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(Created page with "Category:gene == Gene SJ07303 == * transcription-direction: ** negative * right-end-position: ** 300522 * left-end-position: ** 268343 * centisome-position: ** 57.82831...")
(Created page with "Category:gene == Gene SJ15967 == * transcription-direction: ** positive * right-end-position: ** 198793 * left-end-position: ** 192166 * centisome-position: ** 66.52703...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ07303 ==
+
== Gene SJ15967 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 300522
+
** 198793
 
* left-end-position:
 
* left-end-position:
** 268343
+
** 192166
 
* centisome-position:
 
* centisome-position:
** 57.82831    
+
** 66.52703    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.18.1.2-RXN]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN1G-1435]]
+
* [[RXN-17897]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[RXN1G-1436]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1437]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1438]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TREHALOSEPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWYG-321]]
+
* [[PWY-101]]
** '''26''' reactions found over '''182''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[TRESYN-PWY]]
+
{{#set: transcription-direction=positive}}
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=198793}}
* [[PWY-7900]]
+
{{#set: left-end-position=192166}}
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: centisome-position=66.52703   }}
* [[PWY-881]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[TREHALOSESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=300522}}
 
{{#set: left-end-position=268343}}
 
{{#set: centisome-position=57.82831   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:16, 15 March 2021

Gene SJ15967

  • transcription-direction:
    • positive
  • right-end-position:
    • 198793
  • left-end-position:
    • 192166
  • centisome-position:
    • 66.52703

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-101
    • 2 reactions found over 4 reactions in the full pathway