Difference between revisions of "SJ04084"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19492 CPD-19492] == * common-name: ** 3-ethyl-2-oxosuccinate * smiles: ** ccc(c([o-])=o)c(c...")
(Created page with "Category:gene == Gene SJ02174 == * transcription-direction: ** positive * right-end-position: ** 208114 * left-end-position: ** 200087 * centisome-position: ** 36.814198...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19492 CPD-19492] ==
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== Gene SJ02174 ==
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* common-name:
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* transcription-direction:
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** 3-ethyl-2-oxosuccinate
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** positive
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* smiles:
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* right-end-position:
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** ccc(c([o-])=o)c(c(=o)[o-])=o
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** 208114
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* inchi-key:
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* left-end-position:
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** ouglpihdpbrsid-uhfffaoysa-l
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** 200087
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* molecular-weight:
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* centisome-position:
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** 158.11
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** 36.814198   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-18210]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-18210]]
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* [[PEROXID-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-ethyl-2-oxosuccinate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ouglpihdpbrsid-uhfffaoysa-l}}
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* [[RXN-14240]]
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{{#set: molecular-weight=158.11}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=208114}}
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{{#set: left-end-position=200087}}
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{{#set: centisome-position=36.814198    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Revision as of 20:20, 18 December 2020

Gene SJ02174

  • transcription-direction:
    • positive
  • right-end-position:
    • 208114
  • left-end-position:
    • 200087
  • centisome-position:
    • 36.814198

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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