Difference between revisions of "SJ04223"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GLUTAMATE_GAMMA-SEMIALDEHYDE L-GLUTAMATE_GAMMA-SEMIALDEHYDE] == * common-name: ** l-glutamate...")
(Created page with "Category:gene == Gene SJ04223 == * transcription-direction: ** negative * right-end-position: ** 108409 * left-end-position: ** 101345 * centisome-position: ** 92.71932...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GLUTAMATE_GAMMA-SEMIALDEHYDE L-GLUTAMATE_GAMMA-SEMIALDEHYDE] ==
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== Gene SJ04223 ==
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* common-name:
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* transcription-direction:
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** l-glutamate-5-semialdehyde
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** negative
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* smiles:
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* right-end-position:
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** c(cc([n+])c([o-])=o)[ch]=o
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** 108409
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* inchi-key:
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* left-end-position:
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** kabxuufdpuojmw-bypyzucnsa-n
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** 101345
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* molecular-weight:
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* centisome-position:
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** 131.131
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** 92.71932   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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== Reaction(s) associated ==
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* [[RXN-14116]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to produce the compound ==
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* [[3.1.1.64-RXN]]
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* [[G5DH]]
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** Category: [[annotation]]
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* [[G5DHm]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLUTSEMIALDEHYDROG-RXN]]
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* [[CARBOXYLESTERASE-RXN]]
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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** Category: [[annotation]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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{{#set: common-name=l-glutamate-5-semialdehyde}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=kabxuufdpuojmw-bypyzucnsa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=131.131}}
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=108409}}
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{{#set: left-end-position=101345}}
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{{#set: centisome-position=92.71932    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:01, 18 March 2021

Gene SJ04223

  • transcription-direction:
    • negative
  • right-end-position:
    • 108409
  • left-end-position:
    • 101345
  • centisome-position:
    • 92.71932

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04223&oldid=132026"