Difference between revisions of "SJ04280"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ12140 == * transcription-direction: ** negative * right-end-position: ** 325524 * left-end-position: ** 323701 * centisome-position: ** 89.53493...") |
(Created page with "Category:gene == Gene SJ20124 == * transcription-direction: ** positive * right-end-position: ** 113500 * left-end-position: ** 103242 * centisome-position: ** 48.47543...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20124 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 113500 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 103242 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 48.47543 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-15556]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15563]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN-15564]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN-15565]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[UBIQUITIN--PROTEIN-LIGASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7511]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=113500}} | ||
| + | {{#set: left-end-position=103242}} | ||
| + | {{#set: centisome-position=48.47543 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=1}} | + | {{#set: nb reaction associated=5}} |
| + | {{#set: nb pathway associated=1}} | ||
Revision as of 18:51, 14 January 2021
Contents
Gene SJ20124
- transcription-direction:
- positive
- right-end-position:
- 113500
- left-end-position:
- 103242
- centisome-position:
- 48.47543
Organism(s) associated with this gene
Reaction(s) associated
- RXN-15556
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-15563
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15564
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15565
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UBIQUITIN--PROTEIN-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7511
- 7 reactions found over 9 reactions in the full pathway
