Difference between revisions of "SJ04308"

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(Created page with "Category:gene == Gene SJ09653 == * transcription-direction: ** positive * right-end-position: ** 29154 * left-end-position: ** 18956 * centisome-position: ** 49.86846...")
(Created page with "Category:gene == Gene SJ18183 == * transcription-direction: ** negative * right-end-position: ** 119252 * left-end-position: ** 115282 * centisome-position: ** 45.860386...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09653 ==
+
== Gene SJ18183 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 29154
+
** 119252
 
* left-end-position:
 
* left-end-position:
−
** 18956
+
** 115282
 
* centisome-position:
 
* centisome-position:
−
** 49.86846    
+
** 45.860386    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[OHMETPYRKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[PYRIMSYN3-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15288]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12610]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17352]]
+
* [[RXN-12611]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8635]]
+
* [[THI-P-SYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6910]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7357]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7356]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6890]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7282]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6907]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6893]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-6894]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-6908]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-6897]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5469]]
+
</div>
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-5461]]
+
{{#set: right-end-position=119252}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: left-end-position=115282}}
−
{{#set: transcription-direction=positive}}
+
{{#set: centisome-position=45.860386   }}
−
{{#set: right-end-position=29154}}
 
−
{{#set: left-end-position=18956}}
 
−
{{#set: centisome-position=49.86846   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=10}}

Revision as of 13:07, 14 January 2021

Gene SJ18183

  • transcription-direction:
    • negative
  • right-end-position:
    • 119252
  • left-end-position:
    • 115282
  • centisome-position:
    • 45.860386

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6910
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7357
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6890
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6907
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6893
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6894
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6908
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6897
    • 3 reactions found over 3 reactions in the full pathway




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