Difference between revisions of "SJ04318"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9899 CPD-9899] == * common-name: ** 3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate * sm...")
(Created page with "Category:gene == Gene SJ19144 == * transcription-direction: ** positive * right-end-position: ** 85373 * left-end-position: ** 75227 * centisome-position: ** 11.757654...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9899 CPD-9899] ==
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== Gene SJ19144 ==
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* common-name:
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* transcription-direction:
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** 3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate
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** positive
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(=c(c(oc)=cc(c([o-])=o)=c1)o))c)c)c)c)c)c)c)c
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** 85373
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* inchi-key:
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* left-end-position:
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** dzwhypvptjpqqx-mycgwmctsa-m
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** 75227
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* molecular-weight:
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* centisome-position:
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** 712.086
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** 11.757654   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[RXN-9280]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[QUINOPRIBOTRANS-RXN]]
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{{#set: common-name=3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=dzwhypvptjpqqx-mycgwmctsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=712.086}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5653]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7342]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5316]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=85373}}
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{{#set: left-end-position=75227}}
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{{#set: centisome-position=11.757654    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ19144

  • transcription-direction:
    • positive
  • right-end-position:
    • 85373
  • left-end-position:
    • 75227
  • centisome-position:
    • 11.757654

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7342
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5316
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04318&oldid=41250"