Difference between revisions of "SJ04322"

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(Created page with "Category:gene == Gene SJ04447 == * transcription-direction: ** negative * right-end-position: ** 504393 * left-end-position: ** 498084 * centisome-position: ** 97.50027...")
(Created page with "Category:gene == Gene SJ08598 == * transcription-direction: ** positive * right-end-position: ** 635633 * left-end-position: ** 634977 * centisome-position: ** 73.93564...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04447 ==
+
== Gene SJ08598 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 504393
+
** 635633
 
* left-end-position:
 
* left-end-position:
−
** 498084
+
** 634977
 
* centisome-position:
 
* centisome-position:
−
** 97.50027    
+
** 73.93564    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.10.1-RXN]]
+
* [[GAMMA-GLUTAMYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.7.12.1-RXN]]
+
* [[RXN-12618]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[RXN-18092]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-6601]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14906]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[RXN-9157]]
−
{{#set: right-end-position=504393}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=498084}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=97.50027   }}
+
* [[RXN66-336]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** Category: [[annotation]]
−
{{#set: nb reaction associated=4}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7559]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4041]]
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5826]]
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY66-375]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=635633}}
 +
{{#set: left-end-position=634977}}
 +
{{#set: centisome-position=73.93564   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:24, 18 December 2020

Gene SJ08598

  • transcription-direction:
    • positive
  • right-end-position:
    • 635633
  • left-end-position:
    • 634977
  • centisome-position:
    • 73.93564

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7559
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4041
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-5826
    • 2 reactions found over 14 reactions in the full pathway
  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway




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