Difference between revisions of "SJ04397"

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(Created page with "Category:gene == Gene SJ16805 == * transcription-direction: ** negative * right-end-position: ** 109727 * left-end-position: ** 105267 * centisome-position: ** 38.04703...")
(Created page with "Category:gene == Gene SJ10590 == * transcription-direction: ** positive * right-end-position: ** 217819 * left-end-position: ** 216689 * centisome-position: ** 55.83099...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16805 ==
+
== Gene SJ10590 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 109727
+
** 217819
 
* left-end-position:
 
* left-end-position:
** 105267
+
** 216689
 
* centisome-position:
 
* centisome-position:
** 38.04703    
+
** 55.83099    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.2.1.8-RXN]]
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[ATPSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7219]]
+
* [[PWY-6784]]
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7210]]
+
{{#set: transcription-direction=positive}}
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=217819}}
* [[PWY-7198]]
+
{{#set: left-end-position=216689}}
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=55.83099   }}
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=109727}}
 
{{#set: left-end-position=105267}}
 
{{#set: centisome-position=38.04703   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:23, 15 March 2021

Gene SJ10590

  • transcription-direction:
    • positive
  • right-end-position:
    • 217819
  • left-end-position:
    • 216689
  • centisome-position:
    • 55.83099

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6784
    • 2 reactions found over 3 reactions in the full pathway