Difference between revisions of "SJ04397"

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(Created page with "Category:gene == Gene SJ16805 == * transcription-direction: ** negative * right-end-position: ** 109727 * left-end-position: ** 105267 * centisome-position: ** 38.04703...")
(Created page with "Category:gene == Gene SJ04397 == * transcription-direction: ** positive * right-end-position: ** 107199 * left-end-position: ** 79519 * centisome-position: ** 73.79405...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16805 ==
+
== Gene SJ04397 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 109727
+
** 107199
 
* left-end-position:
 
* left-end-position:
−
** 105267
+
** 79519
 
* centisome-position:
 
* centisome-position:
−
** 38.04703    
+
** 73.79405    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
−
* [[ATPSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[PWY-7539]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-6797]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6147]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]]
+
{{#set: transcription-direction=positive}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=107199}}
−
* [[PWY-6545]]
+
{{#set: left-end-position=79519}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=73.79405   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=109727}}
 
−
{{#set: left-end-position=105267}}
 
−
{{#set: centisome-position=38.04703   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ04397

  • transcription-direction:
    • positive
  • right-end-position:
    • 107199
  • left-end-position:
    • 79519
  • centisome-position:
    • 73.79405

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway




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