Difference between revisions of "SJ04397"
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(Created page with "Category:gene == Gene SJ12431 == * transcription-direction: ** negative * right-end-position: ** 323433 * left-end-position: ** 304855 * centisome-position: ** 85.16407...") |
(Created page with "Category:gene == Gene SJ04397 == * transcription-direction: ** positive * right-end-position: ** 107199 * left-end-position: ** 79519 * centisome-position: ** 73.79405...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04397 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 107199 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 79519 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 73.79405 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7539]] |
| − | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6797]] |
| − | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6147]] |
| − | |||
| − | |||
| − | |||
| − | |||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| − | + | {{#set: transcription-direction=positive}} | |
| − | + | {{#set: right-end-position=107199}} | |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=79519}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=73.79405 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ04397
- transcription-direction:
- positive
- right-end-position:
- 107199
- left-end-position:
- 79519
- centisome-position:
- 73.79405
Organism(s) associated with this gene
Reaction(s) associated
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
