Difference between revisions of "SJ04397"

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(Created page with "Category:gene == Gene SJ18627 == * transcription-direction: ** negative * right-end-position: ** 56308 * left-end-position: ** 52653 * centisome-position: ** 21.849169...")
(Created page with "Category:gene == Gene SJ04397 == * transcription-direction: ** positive * right-end-position: ** 107199 * left-end-position: ** 79519 * centisome-position: ** 73.79405...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18627 ==
+
== Gene SJ04397 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 56308
+
** 107199
 
* left-end-position:
 
* left-end-position:
−
** 52653
+
** 79519
 
* centisome-position:
 
* centisome-position:
−
** 21.849169    
+
** 73.79405    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
−
* [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.3.1.75-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12547]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12639]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15090]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9356]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4193]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5885]]
+
* [[PWY-7539]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5884]]
+
* [[PWY-6797]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[TRIGLSYN-PWY]]
+
* [[PWY-6147]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6873]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=107199}}
−
* [[PWY-7420]]
+
{{#set: left-end-position=79519}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=73.79405   }}
−
* [[PWY-282]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
{{#set: nb reaction associated=3}}
−
{{#set: transcription-direction=negative}}
+
{{#set: nb pathway associated=3}}
−
{{#set: right-end-position=56308}}
 
−
{{#set: left-end-position=52653}}
 
−
{{#set: centisome-position=21.849169   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=9}}
 
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:10, 18 March 2021

Gene SJ04397

  • transcription-direction:
    • positive
  • right-end-position:
    • 107199
  • left-end-position:
    • 79519
  • centisome-position:
    • 73.79405

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04397&oldid=136475"