Difference between revisions of "SJ04408"

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(Created page with "Category:gene == Gene SJ14691 == * transcription-direction: ** positive * right-end-position: ** 128470 * left-end-position: ** 123746 * centisome-position: ** 39.84044...")
(Created page with "Category:gene == Gene SJ04408 == * transcription-direction: ** positive * right-end-position: ** 21914 * left-end-position: ** 2094 * centisome-position: ** 1.9455181...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14691 ==
+
== Gene SJ04408 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 128470
+
** 21914
 
* left-end-position:
 
* left-end-position:
−
** 123746
+
** 2094
 
* centisome-position:
 
* centisome-position:
−
** 39.84044    
+
** 1.9455181    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SERINE-O-ACETTRAN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CARBOXYLESTERASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LYSOPHOSPHOLIPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15035]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7870]]
+
* [[PWY-6303]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7274]]
+
* [[PWY-6857]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[CYSTSYN-PWY]]
+
* [[PWY-7409]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6936]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=128470}}
+
{{#set: right-end-position=21914}}
−
{{#set: left-end-position=123746}}
+
{{#set: left-end-position=2094}}
−
{{#set: centisome-position=39.84044   }}
+
{{#set: centisome-position=1.9455181   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:09, 18 March 2021

Gene SJ04408

  • transcription-direction:
    • positive
  • right-end-position:
    • 21914
  • left-end-position:
    • 2094
  • centisome-position:
    • 1.9455181

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7409
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04408&oldid=136105"