Difference between revisions of "SJ04428"

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(Created page with "Category:gene == Gene SJ11916 == * transcription-direction: ** positive * right-end-position: ** 444608 * left-end-position: ** 428266 * centisome-position: ** 55.380676...")
 
(Created page with "Category:gene == Gene SJ05858 == * transcription-direction: ** negative * right-end-position: ** 69113 * left-end-position: ** 58778 * centisome-position: ** 67.518234...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11916 ==
+
== Gene SJ05858 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 444608
+
** 69113
 
* left-end-position:
 
* left-end-position:
−
** 428266
+
** 58778
 
* centisome-position:
 
* centisome-position:
−
** 55.380676    
+
** 67.518234    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATPASE-RXN]]
+
* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
+
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1321]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13395]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8497]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[RXN-8647]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11135]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6797]]
+
* [[PWY66-375]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6147]]
+
* [[PWY-5410]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7539]]
+
* [[PWY-735]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY66-392]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6917]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5406]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5407]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5408]]
−
{{#set: right-end-position=444608}}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=428266}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=55.380676   }}
+
{{#set: right-end-position=69113}}
 +
{{#set: left-end-position=58778}}
 +
{{#set: centisome-position=67.518234   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=8}}

Revision as of 14:22, 26 August 2019

Gene SJ05858

  • transcription-direction:
    • negative
  • right-end-position:
    • 69113
  • left-end-position:
    • 58778
  • centisome-position:
    • 67.518234

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY66-392
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04428&oldid=19050"