Difference between revisions of "SJ04428"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ08693 == * transcription-direction: ** positive * right-end-position: ** 355625 * left-end-position: ** 342448 * centisome-position: ** 78.8591...")
(Created page with "Category:gene == Gene SJ03348 == * transcription-direction: ** negative * right-end-position: ** 47774 * left-end-position: ** 40886 * centisome-position: ** 33.43364...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08693 ==
+
== Gene SJ03348 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 355625
+
** 47774
 
* left-end-position:
 
* left-end-position:
−
** 342448
+
** 40886
 
* centisome-position:
 
* centisome-position:
−
** 78.8591    
+
** 33.43364    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PROTEIN-KINASE-RXN]]
−
* [[1.11.1.15-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PEROXID-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
* [[RXN-14240]]
+
{{#set: right-end-position=47774}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=40886}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=33.43364   }}
−
* [[RXN-15288]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** Category: [[annotation]]
+
{{#set: nb reaction associated=1}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5468]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7214]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7445]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5466]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=355625}}
 
−
{{#set: left-end-position=342448}}
 
−
{{#set: centisome-position=78.8591   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=7}}
 
−
{{#set: nb pathway associated=6}}
 

Revision as of 20:29, 18 December 2020

Gene SJ03348

  • transcription-direction:
    • negative
  • right-end-position:
    • 47774
  • left-end-position:
    • 40886
  • centisome-position:
    • 33.43364

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04428&oldid=45055"