Difference between revisions of "SJ04451"
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(Created page with "Category:gene == Gene SJ17425 == * transcription-direction: ** positive * right-end-position: ** 129047 * left-end-position: ** 123551 * centisome-position: ** 18.268372...") |
(Created page with "Category:gene == Gene SJ04451 == * transcription-direction: ** negative * right-end-position: ** 100679 * left-end-position: ** 80548 * centisome-position: ** 15.767323...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04451 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 100679 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 80548 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 15.767323 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[NICOTINATEPRIBOSYLTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[QUINOPRIBOTRANS-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PYRIDNUCSAL-PWY]] | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-5381]] | ||
| + | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-5653]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PYRIDNUCSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7342]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5316]] | ||
| + | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=100679}} | ||
| + | {{#set: left-end-position=80548}} | ||
| + | {{#set: centisome-position=15.767323 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=6}} | ||
Latest revision as of 11:05, 18 March 2021
Contents
Gene SJ04451
- transcription-direction:
- negative
- right-end-position:
- 100679
- left-end-position:
- 80548
- centisome-position:
- 15.767323
Organism(s) associated with this gene
Reaction(s) associated
- NICOTINATEPRIBOSYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- QUINOPRIBOTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PYRIDNUCSAL-PWY
- 4 reactions found over 7 reactions in the full pathway
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
- PWY-5653
- 3 reactions found over 4 reactions in the full pathway
- PYRIDNUCSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-7342
- 4 reactions found over 9 reactions in the full pathway
- PWY-5316
- 3 reactions found over 9 reactions in the full pathway
