Difference between revisions of "SJ04468"

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(Created page with "Category:gene == Gene SJ11682 == * transcription-direction: ** positive * right-end-position: ** 78879 * left-end-position: ** 76099 * centisome-position: ** 20.572357...")
(Created page with "Category:gene == Gene SJ02118 == * transcription-direction: ** positive * right-end-position: ** 47083 * left-end-position: ** 36880 * centisome-position: ** 26.07337...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11682 ==
+
== Gene SJ02118 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 78879
+
** 47083
 
* left-end-position:
 
* left-end-position:
−
** 76099
+
** 36880
 
* centisome-position:
 
* centisome-position:
−
** 20.572357    
+
** 26.07337    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[RXN-14971]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15378]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCDH_LPAREN_q8_RPAREN_m]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6969]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-561]]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY0-1353]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3781]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-4302]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1329]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=78879}}
+
{{#set: right-end-position=47083}}
−
{{#set: left-end-position=76099}}
+
{{#set: left-end-position=36880}}
−
{{#set: centisome-position=20.572357   }}
+
{{#set: centisome-position=26.07337   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=13}}

Revision as of 18:43, 14 January 2021

Gene SJ02118

  • transcription-direction:
    • positive
  • right-end-position:
    • 47083
  • left-end-position:
    • 36880
  • centisome-position:
    • 26.07337

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6969
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway




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