Difference between revisions of "SJ04472"

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(Created page with "Category:gene == Gene SJ00717 == * transcription-direction: ** positive * right-end-position: ** 310410 * left-end-position: ** 294546 * centisome-position: ** 52.17054...")
(Created page with "Category:gene == Gene SJ09091 == * transcription-direction: ** positive * right-end-position: ** 47572 * left-end-position: ** 40935 * centisome-position: ** 9.606133...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00717 ==
+
== Gene SJ09091 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 310410
+
** 47572
 
* left-end-position:
 
* left-end-position:
** 294546
+
** 40935
 
* centisome-position:
 
* centisome-position:
** 52.17054    
+
** 9.606133    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3.1.3.16-RXN]]
+
* [[RXN-5285]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN1F-10]]
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[CHLOROPHYLL-SYN]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=310410}}
+
{{#set: right-end-position=47572}}
{{#set: left-end-position=294546}}
+
{{#set: left-end-position=40935}}
{{#set: centisome-position=52.17054   }}
+
{{#set: centisome-position=9.606133   }}
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=1}}

Revision as of 20:23, 18 December 2020

Gene SJ09091

  • transcription-direction:
    • positive
  • right-end-position:
    • 47572
  • left-end-position:
    • 40935
  • centisome-position:
    • 9.606133

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated