Difference between revisions of "SJ04474"

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(Created page with "Category:gene == Gene SJ14154 == * transcription-direction: ** positive * right-end-position: ** 36694 * left-end-position: ** 10747 * centisome-position: ** 1.4958404...")
(Created page with "Category:gene == Gene SJ16452 == * transcription-direction: ** negative * right-end-position: ** 256671 * left-end-position: ** 242215 * centisome-position: ** 85.77444...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14154 ==
+
== Gene SJ16452 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 36694
+
** 256671
 
* left-end-position:
 
* left-end-position:
−
** 10747
+
** 242215
 
* centisome-position:
 
* centisome-position:
−
** 1.4958404    
+
** 85.77444    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPOXNPHOSPHN-RXN]]
+
* [[UA4E]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UDPGLUCEPIM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15115]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[UG4E]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[GLUCONEO-PWY]]
+
* [[PWY-5512]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P124-PWY]]
+
* [[PWY-7820]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[P185-PWY]]
+
* [[PWY-5514]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[P122-PWY]]
+
* [[PWY-6317]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5484]]
+
* [[PWY-7344]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-1042]]
+
* [[COLANSYN-PWY]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''1''' reactions in the full pathway
−
* [[GLYCOLYSIS]]
+
* [[PWY-6397]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''17''' reactions in the full pathway
−
* [[ANAGLYCOLYSIS-PWY]]
+
* [[PWY-7328]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''2''' reactions in the full pathway
−
* [[SUCSYN-PWY]]
+
* [[PWY66-422]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY66-399]]
+
* [[PWY-3821]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6901]]
+
* [[PWY-6527]]
−
** '''10''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
 
</div>
 
</div>
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=36694}}
+
{{#set: right-end-position=256671}}
−
{{#set: left-end-position=10747}}
+
{{#set: left-end-position=242215}}
−
{{#set: centisome-position=1.4958404   }}
+
{{#set: centisome-position=85.77444   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=11}}

Revision as of 13:01, 14 January 2021

Gene SJ16452

  • transcription-direction:
    • negative
  • right-end-position:
    • 256671
  • left-end-position:
    • 242215
  • centisome-position:
    • 85.77444

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5512
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7820
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7344
    • 1 reactions found over 1 reactions in the full pathway
  • COLANSYN-PWY
    • 6 reactions found over 1 reactions in the full pathway
  • PWY-6397
    • 1 reactions found over 17 reactions in the full pathway
  • PWY-7328
    • 5 reactions found over 2 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway
  • PWY-3821
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04474&oldid=81642"