Difference between revisions of "SJ04535"

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(Created page with "Category:gene == Gene SJ11489 == * transcription-direction: ** positive * right-end-position: ** 52253 * left-end-position: ** 37232 * centisome-position: ** 10.01792...")
(Created page with "Category:gene == Gene SJ07066 == * transcription-direction: ** positive * right-end-position: ** 180256 * left-end-position: ** 177130 * centisome-position: ** 38.146286...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11489 ==
+
== Gene SJ07066 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 52253
+
** 180256
 
* left-end-position:
 
* left-end-position:
−
** 37232
+
** 177130
 
* centisome-position:
 
* centisome-position:
−
** 10.01792    
+
** 38.146286    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATPASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DOLICHYLDIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11109]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-16030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-16121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6147]]
+
* [[TRIGLSYN-PWY]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7539]]
+
* [[PWY-6453]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6797]]
 
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-7782]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-7198]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7184]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=52253}}
+
{{#set: right-end-position=180256}}
−
{{#set: left-end-position=37232}}
+
{{#set: left-end-position=177130}}
−
{{#set: centisome-position=10.01792   }}
+
{{#set: centisome-position=38.146286   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Revision as of 11:07, 15 January 2021

Gene SJ07066

  • transcription-direction:
    • positive
  • right-end-position:
    • 180256
  • left-end-position:
    • 177130
  • centisome-position:
    • 38.146286

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04535&oldid=108410"