Difference between revisions of "SJ04559"
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(Created page with "Category:gene == Gene SJ14397 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-14387 ** Category:...") |
(Created page with "Category:gene == Gene SJ00207 == * transcription-direction: ** positive * right-end-position: ** 340749 * left-end-position: ** 335329 * centisome-position: ** 58.86001...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ00207 == |
+ | * transcription-direction: | ||
+ | ** positive | ||
+ | * right-end-position: | ||
+ | ** 340749 | ||
+ | * left-end-position: | ||
+ | ** 335329 | ||
+ | * centisome-position: | ||
+ | ** 58.86001 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[RXN- | + | * [[2.4.1.134-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[2.4.1.151-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[2.4.1.223-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14841]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6557]] |
− | ** '''5''' reactions found over ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-7434]] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6558]] | ||
+ | ** '''7''' reactions found over '''13''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=340749}} | ||
+ | {{#set: left-end-position=335329}} | ||
+ | {{#set: centisome-position=58.86001 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 15:18, 5 January 2021
Contents
Gene SJ00207
- transcription-direction:
- positive
- right-end-position:
- 340749
- left-end-position:
- 335329
- centisome-position:
- 58.86001
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.134-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.151-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.223-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14841
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6557
- 2 reactions found over 4 reactions in the full pathway
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-6558
- 7 reactions found over 13 reactions in the full pathway