Difference between revisions of "SJ04581"
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(Created page with "Category:gene == Gene SJ06261 == * transcription-direction: ** negative * right-end-position: ** 344050 * left-end-position: ** 333611 * centisome-position: ** 69.61992...") |
(Created page with "Category:gene == Gene SJ04581 == * transcription-direction: ** negative * right-end-position: ** 27433 * left-end-position: ** 17611 * centisome-position: ** 16.771263...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04581 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 27433 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 17611 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.771263 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[1.3.7.3-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[1.3.7.4-RXN]] |
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[R05819]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5915]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7579]] |
| − | ** ''' | + | ** '''3''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7170]] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | |||
| − | |||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=27433}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=17611}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=16.771263 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 13:04, 14 January 2021
Contents
Gene SJ04581
- transcription-direction:
- negative
- right-end-position:
- 27433
- left-end-position:
- 17611
- centisome-position:
- 16.771263
Organism(s) associated with this gene
Reaction(s) associated
- 1.3.7.3-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 1.3.7.4-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- R05819
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5915
- 3 reactions found over 4 reactions in the full pathway
- PWY-7579
- 3 reactions found over 5 reactions in the full pathway
- PWY-7170
- 2 reactions found over 3 reactions in the full pathway
