Difference between revisions of "SJ04585"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ18141 == * transcription-direction: ** positive * right-end-position: ** 31826 * left-end-position: ** 27662 * centisome-position: ** 10.984656...")
(Created page with "Category:gene == Gene SJ04585 == * transcription-direction: ** negative * right-end-position: ** 17163 * left-end-position: ** 8234 * centisome-position: ** 7.850578 =...")
 
(5 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18141 ==
+
== Gene SJ04585 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 31826
+
** 17163
 
* left-end-position:
 
* left-end-position:
−
** 27662
+
** 8234
 
* centisome-position:
 
* centisome-position:
−
** 10.984656    
+
** 7.850578    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PEROXID-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5224]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12440]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-3521]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6959]]
−
* [[PWYQT-4429]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6960]]
−
* [[CYANCAT-PWY]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6961]]
−
* [[PWY-5744]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7214]]
−
* [[PWY-5789]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-5743]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5466]]
−
* [[PWY-241]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6824]]
−
* [[PWY-7115]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-5469]]
−
* [[PWY-7117]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-2261]]
−
{{#set: transcription-direction=positive}}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
{{#set: right-end-position=31826}}
+
* [[PWY-5461]]
−
{{#set: left-end-position=27662}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: centisome-position=10.984656   }}
+
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=17163}}
 +
{{#set: left-end-position=8234}}
 +
{{#set: centisome-position=7.850578   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:01, 18 March 2021

Gene SJ04585

  • transcription-direction:
    • negative
  • right-end-position:
    • 17163
  • left-end-position:
    • 8234
  • centisome-position:
    • 7.850578

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6959
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6960
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6961
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-2261
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04585&oldid=132073"