Difference between revisions of "SJ04586"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2231 CPD0-2231] == * common-name: ** didp * smiles: ** c(op(=o)([o-])op(=o)([o-])[o-])c1(o...")
(Created page with "Category:gene == Gene SJ20035 == * transcription-direction: ** negative * right-end-position: ** 376874 * left-end-position: ** 361061 * centisome-position: ** 58.045406...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2231 CPD0-2231] ==
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== Gene SJ20035 ==
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* common-name:
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* transcription-direction:
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** didp
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** negative
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* smiles:
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* right-end-position:
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** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(cc(o)1)n3(c=nc2(c(=o)nc=nc=23)))
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** 376874
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* inchi-key:
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* left-end-position:
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** bkusikgspsfqac-rrkcrqdmsa-k
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** 361061
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* molecular-weight:
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* centisome-position:
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** 409.165
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** 58.045406   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14228]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-14228]]
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* [[ADDALT-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=didp}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=bkusikgspsfqac-rrkcrqdmsa-k}}
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* [[ADENODEAMIN-RXN]]
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{{#set: molecular-weight=409.165}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DCMP-DEAMINASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7179-1]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7179]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6611]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[SALVADEHYPOX-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6609]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1296]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=376874}}
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{{#set: left-end-position=361061}}
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{{#set: centisome-position=58.045406    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=7}}

Revision as of 20:20, 18 December 2020

Gene SJ20035

  • transcription-direction:
    • negative
  • right-end-position:
    • 376874
  • left-end-position:
    • 361061
  • centisome-position:
    • 58.045406

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7179-1
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7179
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway




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