Difference between revisions of "SJ04593"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7496 CPD-7496] == * common-name: ** prolycopene * smiles: ** cc(=cccc(=cc=cc(c)=cc=cc(=cc=c...")
(Created page with "Category:gene == Gene SJ04593 == * transcription-direction: ** negative * right-end-position: ** 242165 * left-end-position: ** 231326 * centisome-position: ** 45.51753...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
[[Category:metabolite]]
+
[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7496 CPD-7496] ==
+
== Gene SJ04593 ==
* common-name:
+
* transcription-direction:
** prolycopene
+
** negative
* smiles:
+
* right-end-position:
** cc(=cccc(=cc=cc(c)=cc=cc(=cc=cc=c(c=cc=c(c)c=cc=c(ccc=c(c)c)c)c)c)c)c
+
** 242165
* inchi-key:
+
* left-end-position:
** oaijszizwzsqbc-byunhuqqsa-n
+
** 231326
* molecular-weight:
+
* centisome-position:
** 536.882
+
** 45.51753   
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
* [[RXN-8042]]
+
* [[S.japonica_carotenoid_curated]]
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
* [[RXN-11357]]
+
* [[IGPSYN-RXN]]
* [[RXN-12242]]
+
** Category: [[annotation]]
== Reaction(s) of unknown directionality ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: common-name=prolycopene}}
+
** Category: [[orthology]]
{{#set: inchi-key=inchikey=oaijszizwzsqbc-byunhuqqsa-n}}
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
{{#set: molecular-weight=536.882}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[TRPSYN-PWY]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=242165}}
 +
{{#set: left-end-position=231326}}
 +
{{#set: centisome-position=45.51753    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ04593

  • transcription-direction:
    • negative
  • right-end-position:
    • 242165
  • left-end-position:
    • 231326
  • centisome-position:
    • 45.51753

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway