Difference between revisions of "SJ04728"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ16608 == * transcription-direction: ** positive * right-end-position: ** 451852 * left-end-position: ** 445935 * centisome-position: ** 65.25003...") |
(Created page with "Category:gene == Gene SJ16475 == * transcription-direction: ** positive * right-end-position: ** 49104 * left-end-position: ** 40372 * centisome-position: ** 14.320985...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ16475 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 49104 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 40372 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 14.320985 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[1.1.1.8-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLYC3PDEHYDROGBIOSYN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-6118]] |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7385]] |
| − | ** '''4''' reactions found over ''' | + | ** '''7''' reactions found over '''9''' reactions in the full pathway |
| + | * [[PWY-7411]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7902]] | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5981]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY0-1319]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5667]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=49104}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=40372}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=14.320985 }} |
| − | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 14:52, 5 January 2021
Contents
Gene SJ16475
- transcription-direction:
- positive
- right-end-position:
- 49104
- left-end-position:
- 40372
- centisome-position:
- 14.320985
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.1.8-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GLYC3PDEHYDROGBIOSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6118
- 2 reactions found over 2 reactions in the full pathway
- PWY-7385
- 7 reactions found over 9 reactions in the full pathway
- PWY-7411
- 4 reactions found over 5 reactions in the full pathway
- PWY-7902
- 2 reactions found over 5 reactions in the full pathway
- PWY-5981
- 3 reactions found over 5 reactions in the full pathway
- PWY0-1319
- 4 reactions found over 4 reactions in the full pathway
- PWY-5667
- 4 reactions found over 4 reactions in the full pathway
