Difference between revisions of "SJ04728"

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(Created page with "Category:gene == Gene SJ21884 == * transcription-direction: ** negative * right-end-position: ** 23955 * left-end-position: ** 11350 * centisome-position: ** 1.9222691...")
(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21884 ==
+
== Gene SJ04728 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 23955
+
** 315846
 
* left-end-position:
 
* left-end-position:
−
** 11350
+
** 308870
 
* centisome-position:
 
* centisome-position:
−
** 1.9222691    
+
** 61.02703    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[PHOSACETYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
== Pathway(s) associated ==
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5482]]
−
{{#set: right-end-position=23955}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=11350}}
+
* [[PWY0-1312]]
−
{{#set: centisome-position=1.9222691   }}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[P163-PWY]]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5485]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[P3-PWY]]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY4LZ-257]]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[METH-ACETATE-PWY]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-1281]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6637]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[P161-PWY]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=315846}}
 +
{{#set: left-end-position=308870}}
 +
{{#set: centisome-position=61.02703   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=13}}

Latest revision as of 11:10, 18 March 2021

Gene SJ04728

  • transcription-direction:
    • positive
  • right-end-position:
    • 315846
  • left-end-position:
    • 308870
  • centisome-position:
    • 61.02703

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1312
    • 1 reactions found over 2 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • P163-PWY
    • 3 reactions found over 10 reactions in the full pathway
  • PWY-5485
    • 2 reactions found over 3 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • P3-PWY
    • 3 reactions found over 11 reactions in the full pathway
  • PWY4LZ-257
    • 7 reactions found over 7 reactions in the full pathway
  • METH-ACETATE-PWY
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-1281
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6637
    • 1 reactions found over 4 reactions in the full pathway
  • P161-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway




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