Difference between revisions of "SJ04758"

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(Created page with "Category:gene == Gene SJ20366 == * transcription-direction: ** positive * right-end-position: ** 81718 * left-end-position: ** 56234 * centisome-position: ** 26.942572...")
(Created page with "Category:gene == Gene SJ04758 == * transcription-direction: ** negative * right-end-position: ** 16891 * left-end-position: ** 11934 * centisome-position: ** 11.756130...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20366 ==
+
== Gene SJ04758 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 81718
+
** 16891
 
* left-end-position:
 
* left-end-position:
** 56234
+
** 11934
 
* centisome-position:
 
* centisome-position:
** 26.942572    
+
** 11.756130    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[RXN-11837]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11838]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN-12196]]
+
{{#set: right-end-position=16891}}
** Category: [[annotation]]
+
{{#set: left-end-position=11934}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=11.756130   }}
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=81718}}
 
{{#set: left-end-position=56234}}
 
{{#set: centisome-position=26.942572   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ04758

  • transcription-direction:
    • negative
  • right-end-position:
    • 16891
  • left-end-position:
    • 11934
  • centisome-position:
    • 11.756130

Organism(s) associated with this gene

Reaction(s) associated