Difference between revisions of "SJ04803"

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(Created page with "Category:gene == Gene SJ13957 == * transcription-direction: ** positive * right-end-position: ** 380459 * left-end-position: ** 373689 * centisome-position: ** 51.466995...")
(Created page with "Category:gene == Gene SJ19403 == * transcription-direction: ** negative * right-end-position: ** 515839 * left-end-position: ** 507569 * centisome-position: ** 80.06160...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13957 ==
+
== Gene SJ19403 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 380459
+
** 515839
 
* left-end-position:
 
* left-end-position:
−
** 373689
+
** 507569
 
* centisome-position:
 
* centisome-position:
−
** 51.466995    
+
** 80.06160    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
* [[RXN-11277]]
+
{{#set: right-end-position=515839}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=507569}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=80.06160   }}
−
* [[RXN-16030]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** Category: [[annotation]]
+
{{#set: nb reaction associated=1}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16121]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17730]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[TRIGLSYN-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7039]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6453]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7782]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=380459}}
 
−
{{#set: left-end-position=373689}}
 
−
{{#set: centisome-position=51.466995   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 20:24, 18 December 2020

Gene SJ19403

  • transcription-direction:
    • negative
  • right-end-position:
    • 515839
  • left-end-position:
    • 507569
  • centisome-position:
    • 80.06160

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04803&oldid=43108"