Difference between revisions of "SJ04808"
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(Created page with "Category:gene == Gene SJ04640 == * transcription-direction: ** negative * right-end-position: ** 79954 * left-end-position: ** 73408 * centisome-position: ** 71.0994 =...") |
(Created page with "Category:gene == Gene SJ21863 == * transcription-direction: ** positive * right-end-position: ** 102674 * left-end-position: ** 97880 * centisome-position: ** 52.936436...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21863 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 102674 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 97880 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 52.936436 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ARACHIDONATE-15-LIPOXYGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-1321]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-8497]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5410]] |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | + | ** '''2''' reactions found over '''9''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-735]] |
| − | {{#set: right-end-position= | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6917]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PWY-5406]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5407]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5408]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=102674}} | ||
| + | {{#set: left-end-position=97880}} | ||
| + | {{#set: centisome-position=52.936436 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 11:09, 15 January 2021
Contents
Gene SJ21863
- transcription-direction:
- positive
- right-end-position:
- 102674
- left-end-position:
- 97880
- centisome-position:
- 52.936436
Organism(s) associated with this gene
Reaction(s) associated
- ARACHIDONATE-15-LIPOXYGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1321
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-8497
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5410
- 2 reactions found over 9 reactions in the full pathway
- PWY-735
- 16 reactions found over 19 reactions in the full pathway
- PWY-6917
- 2 reactions found over 3 reactions in the full pathway
- PWY-5406
- 1 reactions found over 4 reactions in the full pathway
- PWY-5407
- 1 reactions found over 5 reactions in the full pathway
- PWY-5408
- 1 reactions found over 4 reactions in the full pathway
