Difference between revisions of "SJ04839"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ07241 == * transcription-direction: ** negative * right-end-position: ** 1235692 * left-end-position: ** 1229445 * centisome-position: ** 84.146545...")
(Created page with "Category:gene == Gene SJ04839 == * transcription-direction: ** negative * right-end-position: ** 287696 * left-end-position: ** 280508 * centisome-position: ** 55.518105...")
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07241 ==
+
== Gene SJ04839 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 1235692
+
** 287696
 
* left-end-position:
 
* left-end-position:
−
** 1229445
+
** 280508
 
* centisome-position:
 
* centisome-position:
−
** 84.146545    
+
** 55.518105    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.8.4.12-RXN]]
−
* [[ACOA40OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACYLCOADEHYDROG-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[IVCDH]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[MCDH]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MCDH_LPAREN_2mb2coa_RPAREN_]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12558]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14264]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-2301]]
+
* [[1.8.4.14-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[FAO-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6863]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6883]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=1235692}}
+
{{#set: right-end-position=287696}}
−
{{#set: left-end-position=1229445}}
+
{{#set: left-end-position=280508}}
−
{{#set: centisome-position=84.146545   }}
+
{{#set: centisome-position=55.518105   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:10, 18 March 2021

Gene SJ04839

  • transcription-direction:
    • negative
  • right-end-position:
    • 287696
  • left-end-position:
    • 280508
  • centisome-position:
    • 55.518105

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04839&oldid=136542"