Difference between revisions of "SJ04850"
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(Created page with "Category:gene == Gene SJ04991 == * transcription-direction: ** negative * right-end-position: ** 796588 * left-end-position: ** 778941 * centisome-position: ** 80.66628...") |
(Created page with "Category:gene == Gene SJ08662 == * transcription-direction: ** positive * right-end-position: ** 299852 * left-end-position: ** 272547 * centisome-position: ** 62.72225...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ08662 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 299852 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 272547 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.72225 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.7.7.64-RXN]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[ | + | * [[GLUC1PURIDYLTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[UTPHEXPURIDYLYLTRANS-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-7817]] |
| − | ** ''' | + | ** '''6''' reactions found over '''16''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7238]] |
| − | {{#set: right-end-position= | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6527]] |
| − | {{#set: centisome-position= | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-3801]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7343]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-3821]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=299852}} | ||
| + | {{#set: left-end-position=272547}} | ||
| + | {{#set: centisome-position=62.72225 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 14:22, 26 August 2019
Contents
Gene SJ08662
- transcription-direction:
- positive
- right-end-position:
- 299852
- left-end-position:
- 272547
- centisome-position:
- 62.72225
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.7.64-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUC1PURIDYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- UTPHEXPURIDYLYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- PWY-6527
- 7 reactions found over 7 reactions in the full pathway
- PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-7343
- 2 reactions found over 2 reactions in the full pathway
- PWY-3821
- 3 reactions found over 3 reactions in the full pathway
