Difference between revisions of "SJ04851"

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(Created page with "Category:gene == Gene SJ07112 == * transcription-direction: ** negative * right-end-position: ** 144922 * left-end-position: ** 139340 * centisome-position: ** 30.009218...")
(Created page with "Category:gene == Gene SJ04851 == * transcription-direction: ** negative * right-end-position: ** 12377 * left-end-position: ** 2540 * centisome-position: ** 2.564465 =...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07112 ==
+
== Gene SJ04851 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 144922
+
** 12377
 
* left-end-position:
 
* left-end-position:
−
** 139340
+
** 2540
 
* centisome-position:
 
* centisome-position:
−
** 30.009218    
+
** 2.564465    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.1.1.5-RXN]]
+
* [[RXN-12720]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MMUM-RXN]]
+
* [[SULFATE-ADENYLYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 26: Line 23:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ADENOSYLHOMOCYSCAT-PWY]]
+
* [[PWY-6932]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[DISSULFRED-PWY]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P224-PWY]]
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-6683]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3661]]
+
* [[SULFMETII-PWY]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3661-1]]
+
* [[PWY-5340]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-702]]
+
* [[PWY-5278]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5441]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=144922}}
+
{{#set: right-end-position=12377}}
−
{{#set: left-end-position=139340}}
+
{{#set: left-end-position=2540}}
−
{{#set: centisome-position=30.009218   }}
+
{{#set: centisome-position=2.564465   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:08, 18 March 2021

Gene SJ04851

  • transcription-direction:
    • negative
  • right-end-position:
    • 12377
  • left-end-position:
    • 2540
  • centisome-position:
    • 2.564465

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6932
    • 1 reactions found over 5 reactions in the full pathway
  • DISSULFRED-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • P224-PWY
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-6683
    • 3 reactions found over 3 reactions in the full pathway
  • SULFMETII-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5340
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5278
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04851&oldid=135575"