Difference between revisions of "SJ04866"

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(Created page with "Category:gene == Gene SJ22621 == * transcription-direction: ** negative * right-end-position: ** 119647 * left-end-position: ** 113455 * centisome-position: ** 65.7192...")
(Created page with "Category:gene == Gene SJ10377 == * transcription-direction: ** negative * right-end-position: ** 726933 * left-end-position: ** 709554 * centisome-position: ** 87.70407...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22621 ==
+
== Gene SJ10377 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 119647
+
** 726933
 
* left-end-position:
 
* left-end-position:
−
** 113455
+
** 709554
 
* centisome-position:
 
* centisome-position:
−
** 65.7192    
+
** 87.70407    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[ARGSUCCINSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12195]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[RXN-10]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-7400]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-4984]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[ARGSYN-PWY]]
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-4983]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5154]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=119647}}
+
{{#set: right-end-position=726933}}
−
{{#set: left-end-position=113455}}
+
{{#set: left-end-position=709554}}
−
{{#set: centisome-position=65.7192   }}
+
{{#set: centisome-position=87.70407   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Revision as of 20:26, 18 December 2020

Gene SJ10377

  • transcription-direction:
    • negative
  • right-end-position:
    • 726933
  • left-end-position:
    • 709554
  • centisome-position:
    • 87.70407

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4983
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04866&oldid=44195"