Difference between revisions of "SJ04922"

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(Created page with "Category:gene == Gene SJ05058 == * transcription-direction: ** negative * right-end-position: ** 3347 * left-end-position: ** 703 * centisome-position: ** 0.13985568 =...")
(Created page with "Category:gene == Gene SJ04922 == * transcription-direction: ** positive * right-end-position: ** 79777 * left-end-position: ** 51287 * centisome-position: ** 52.31926...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05058 ==
+
== Gene SJ04922 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 3347
+
** 79777
 
* left-end-position:
 
* left-end-position:
−
** 703
+
** 51287
 
* centisome-position:
 
* centisome-position:
−
** 0.13985568    
+
** 52.31926    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLUTAMATESYN-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLUTAMIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12878]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY3DJ-12]]
+
* [[PWY-6549]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[PWY-4341]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5129]]
+
* [[PWY-6964]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6963]]
−
{{#set: right-end-position=3347}}
+
** '''4''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=703}}
+
* [[GLUGLNSYN-PWY]]
−
{{#set: centisome-position=0.13985568   }}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUTSYN-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUTAMINEFUM-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLUTAMINDEG-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=79777}}
 +
{{#set: left-end-position=51287}}
 +
{{#set: centisome-position=52.31926   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=9}}

Revision as of 15:17, 5 January 2021

Gene SJ04922

  • transcription-direction:
    • positive
  • right-end-position:
    • 79777
  • left-end-position:
    • 51287
  • centisome-position:
    • 52.31926

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6549
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-4341
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6963
    • 4 reactions found over 2 reactions in the full pathway
  • GLUGLNSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTAMINEFUM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04922&oldid=67926"