Difference between revisions of "SJ04934"
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(Created page with "Category:gene == Gene SJ09532 == * transcription-direction: ** positive * right-end-position: ** 407075 * left-end-position: ** 406281 * centisome-position: ** 98.50884...") |
(Created page with "Category:gene == Gene SJ08954 == * transcription-direction: ** negative * right-end-position: ** 127674 * left-end-position: ** 121909 * centisome-position: ** 28.448647...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ08954 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 127674 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 121909 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 28.448647 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-10815]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | == Pathway(s) associated == |
| − | ** | + | * [[PWY-7432]] |
| − | *** | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[TYRFUMCAT-PWY]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-1581]] |
| − | {{#set: centisome-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PWY-1422]] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6318]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=127674}} | ||
| + | {{#set: left-end-position=121909}} | ||
| + | {{#set: centisome-position=28.448647 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=5}} | ||
Revision as of 14:22, 26 August 2019
Contents
Gene SJ08954
- transcription-direction:
- negative
- right-end-position:
- 127674
- left-end-position:
- 121909
- centisome-position:
- 28.448647
Organism(s) associated with this gene
Reaction(s) associated
- 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10815
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7432
- 3 reactions found over 2 reactions in the full pathway
- TYRFUMCAT-PWY
- 2 reactions found over 5 reactions in the full pathway
- PWY-1581
- 3 reactions found over 3 reactions in the full pathway
- PWY-1422
- 5 reactions found over 7 reactions in the full pathway
- PWY-6318
- 4 reactions found over 9 reactions in the full pathway
