Difference between revisions of "SJ04962"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TDP TDP] == * common-name: ** dtdp * smiles: ** cc1(=cn(c(=o)nc(=o)1)c2(cc(o)c(cop(=o)([o-])op(...")
(Created page with "Category:gene == Gene SJ04962 == * transcription-direction: ** positive * right-end-position: ** 347786 * left-end-position: ** 337319 * centisome-position: ** 34.93239...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TDP TDP] ==
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== Gene SJ04962 ==
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* common-name:
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* transcription-direction:
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** dtdp
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** positive
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* smiles:
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* right-end-position:
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** cc1(=cn(c(=o)nc(=o)1)c2(cc(o)c(cop(=o)([o-])op(=o)([o-])[o-])o2))
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** 347786
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* inchi-key:
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* left-end-position:
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** ujlxyodchaelly-xlpzgreqsa-k
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** 337319
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* molecular-weight:
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* centisome-position:
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** 399.167
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** 34.93239   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[DTDPKIN-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14213]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-12496]]
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* [[DTMPKI-RXN]]
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** Category: [[annotation]]
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* [[THYMIDINE-TRIPHOSPHATASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN1F-150]]
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{{#set: common-name=dtdp}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ujlxyodchaelly-xlpzgreqsa-k}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=399.167}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1F-151]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7591]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7938]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7939]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5943]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=347786}}
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{{#set: left-end-position=337319}}
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{{#set: centisome-position=34.93239    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ04962

  • transcription-direction:
    • positive
  • right-end-position:
    • 347786
  • left-end-position:
    • 337319
  • centisome-position:
    • 34.93239

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7591
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7938
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7939
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5943
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04962&oldid=132924"