Difference between revisions of "SJ04981"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8892 CPD-8892] == * common-name: ** leukotriene a4 * smiles: ** cccccc=ccc=cc=cc=c[ch]1(o[c...")
 
(Created page with "Category:gene == Gene SJ04981 == * transcription-direction: ** positive * right-end-position: ** 606806 * left-end-position: ** 576757 * centisome-position: ** 59.728325...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8892 CPD-8892] ==
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== Gene SJ04981 ==
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* common-name:
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* transcription-direction:
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** leukotriene a4
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** positive
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* smiles:
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* right-end-position:
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** cccccc=ccc=cc=cc=c[ch]1(o[ch]1cccc(=o)[o-])
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** 606806
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* inchi-key:
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* left-end-position:
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** ufpqiryspuyqhk-xwypzhsrsa-m
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** 576757
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* molecular-weight:
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* centisome-position:
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** 317.447
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** 59.728325   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[LEUKOTRIENE-A4-HYDROLASE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[LEUKOTRIENE-C4-SYNTHASE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[RXN-13395]]
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** Category: [[annotation]]
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* [[RXN-8647]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: common-name=leukotriene a4}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ufpqiryspuyqhk-xwypzhsrsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=317.447}}
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* [[RXN-11109]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=606806}}
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{{#set: left-end-position=576757}}
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{{#set: centisome-position=59.728325    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ04981

  • transcription-direction:
    • positive
  • right-end-position:
    • 606806
  • left-end-position:
    • 576757
  • centisome-position:
    • 59.728325

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04981&oldid=131861"