Difference between revisions of "SJ04991"

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(Created page with "Category:gene == Gene SJ06726 == * transcription-direction: ** positive * right-end-position: ** 121372 * left-end-position: ** 57078 * centisome-position: ** 12.09295...")
(Created page with "Category:gene == Gene SJ04991 == * transcription-direction: ** negative * right-end-position: ** 796588 * left-end-position: ** 778941 * centisome-position: ** 80.66628...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06726 ==
+
== Gene SJ04991 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 121372
+
** 796588
 
* left-end-position:
 
* left-end-position:
−
** 57078
+
** 778941
 
* centisome-position:
 
* centisome-position:
−
** 12.09295    
+
** 80.66628    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TDSR]]
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOACXr]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[BIOTIN-CARBOXYL-RXN]]
+
* [[THIOREDOXIN-REDUCT-NADPH-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DALADALALIG-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5055]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[THIOREDOX-PWY]]
−
* [[PWY-7388]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-6679]]
+
{{#set: right-end-position=796588}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
{{#set: left-end-position=778941}}
−
* [[PWY-5744]]
+
{{#set: centisome-position=80.66628   }}
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5743]]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY0-1264]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6722]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4381]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=121372}}
 
−
{{#set: left-end-position=57078}}
 
−
{{#set: centisome-position=12.09295   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:00, 18 March 2021

Gene SJ04991

  • transcription-direction:
    • negative
  • right-end-position:
    • 796588
  • left-end-position:
    • 778941
  • centisome-position:
    • 80.66628

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • THIOREDOX-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04991&oldid=131711"