Difference between revisions of "SJ05001"
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(Created page with "Category:gene == Gene SJ20608 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * DIHYDRONEOPTERIN-MONO-P-...") |
(Created page with "Category:gene == Gene SJ05001 == * transcription-direction: ** negative * right-end-position: ** 124254 * left-end-position: ** 116058 * centisome-position: ** 12.018839...") |
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(8 intermediate revisions by 4 users not shown) | |||
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ05001 == |
+ | * transcription-direction: | ||
+ | ** negative | ||
+ | * right-end-position: | ||
+ | ** 124254 | ||
+ | * left-end-position: | ||
+ | ** 116058 | ||
+ | * centisome-position: | ||
+ | ** 12.018839 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[GTP-CYCLOHYDRO-II-RXN]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[RIBOSYN2-PWY]] |
− | + | ** '''8''' reactions found over '''9''' reactions in the full pathway | |
− | |||
− | ** ''' | ||
* [[PWY-7539]] | * [[PWY-7539]] | ||
** '''4''' reactions found over '''5''' reactions in the full pathway | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6168]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=124254}} | ||
+ | {{#set: left-end-position=116058}} | ||
+ | {{#set: centisome-position=12.018839 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
{{#set: nb pathway associated=3}} | {{#set: nb pathway associated=3}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ05001
- transcription-direction:
- negative
- right-end-position:
- 124254
- left-end-position:
- 116058
- centisome-position:
- 12.018839
Organism(s) associated with this gene
Reaction(s) associated
- GTP-CYCLOHYDRO-II-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway