Difference between revisions of "SJ05004"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ15989 == * transcription-direction: ** positive * right-end-position: ** 278277 * left-end-position: ** 276487 * centisome-position: ** 95.85167...")
(Created page with "Category:gene == Gene SJ05004 == * transcription-direction: ** negative * right-end-position: ** 279718 * left-end-position: ** 272009 * centisome-position: ** 54.056595...")
 
(5 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15989 ==
+
== Gene SJ05004 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 278277
+
** 279718
 
* left-end-position:
 
* left-end-position:
−
** 276487
+
** 272009
 
* centisome-position:
 
* centisome-position:
−
** 95.85167    
+
** 54.056595    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.26.4-RXN]]
+
* [[D-PPENTOMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[PHOSPHOGLUCMUT-RXN]]
−
{{#set: right-end-position=278277}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=276487}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=95.85167   }}
+
* [[PPENTOMUT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16997]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16998]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7180]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6737]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7238]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOGENSYNTH-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7900]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6731]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5941]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-622]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6317]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2723]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3801]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5940]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7902]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5384]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5661]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-422]]
 +
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY0-661]]
 +
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY0-1296]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=279718}}
 +
{{#set: left-end-position=272009}}
 +
{{#set: centisome-position=54.056595   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=21}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05004

  • transcription-direction:
    • negative
  • right-end-position:
    • 279718
  • left-end-position:
    • 272009
  • centisome-position:
    • 54.056595

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7180
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6737
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • GLYCOGENSYNTH-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6731
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-622
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5940
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5384
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5661
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway
  • PWY0-661
    • 1 reactions found over n.a reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05004&oldid=134723"