Difference between revisions of "SJ05004"

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(Created page with "Category:gene == Gene SJ08998 == * transcription-direction: ** negative * right-end-position: ** 713587 * left-end-position: ** 707773 * centisome-position: ** 86.16415...")
(Created page with "Category:gene == Gene SJ05004 == * transcription-direction: ** negative * right-end-position: ** 279718 * left-end-position: ** 272009 * centisome-position: ** 54.056595...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08998 ==
+
== Gene SJ05004 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 713587
+
** 279718
 
* left-end-position:
 
* left-end-position:
−
** 707773
+
** 272009
 
* centisome-position:
 
* centisome-position:
−
** 86.16415    
+
** 54.056595    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[D-PPENTOMUT-RXN]]
−
* [[DCTP-PYROPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DUTP-PYROP-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[FAD-PYROPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14139]]
+
* [[PHOSPHOGLUCMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14140]]
+
* [[PPENTOMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-1441]]
+
* [[RXN-16997]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-383]]
+
* [[RXN-16998]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-385]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5107]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7206]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7180]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6737]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7238]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOGENSYNTH-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7900]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6731]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5941]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-622]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6317]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2723]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3801]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5940]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7902]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5384]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5661]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7187]]
+
* [[PWY66-422]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY0-166]]
+
* [[PWY0-661]]
−
** '''14''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY0-1296]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6545]]
+
</div>
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7821]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=713587}}
+
{{#set: right-end-position=279718}}
−
{{#set: left-end-position=707773}}
+
{{#set: left-end-position=272009}}
−
{{#set: centisome-position=86.16415   }}
+
{{#set: centisome-position=54.056595   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=21}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05004

  • transcription-direction:
    • negative
  • right-end-position:
    • 279718
  • left-end-position:
    • 272009
  • centisome-position:
    • 54.056595

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7180
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6737
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • GLYCOGENSYNTH-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6731
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-622
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5940
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5384
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5661
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway
  • PWY0-661
    • 1 reactions found over n.a reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway




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