Difference between revisions of "SJ05004"

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(Created page with "Category:gene == Gene SJ12089 == * transcription-direction: ** positive * right-end-position: ** 77246 * left-end-position: ** 72791 * centisome-position: ** 20.098682...")
(Created page with "Category:gene == Gene SJ08998 == * transcription-direction: ** negative * right-end-position: ** 713587 * left-end-position: ** 707773 * centisome-position: ** 86.16415...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12089 ==
+
== Gene SJ08998 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 77246
+
** 713587
 
* left-end-position:
 
* left-end-position:
−
** 72791
+
** 707773
 
* centisome-position:
 
* centisome-position:
−
** 20.098682    
+
** 86.16415    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.13.4-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DCTP-PYROPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[DUTP-PYROP-RXN]]
−
{{#set: right-end-position=77246}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=72791}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=20.098682   }}
+
* [[FAD-PYROPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14139]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14140]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1441]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-383]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-384]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-385]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5107]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6382]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7206]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7187]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-166]]
 +
** '''14''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7821]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=713587}}
 +
{{#set: left-end-position=707773}}
 +
{{#set: centisome-position=86.16415   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=12}}
 +
{{#set: nb pathway associated=6}}

Revision as of 13:03, 14 January 2021

Gene SJ08998

  • transcription-direction:
    • negative
  • right-end-position:
    • 713587
  • left-end-position:
    • 707773
  • centisome-position:
    • 86.16415

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7206
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway




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