Difference between revisions of "SJ05045"

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(Created page with "Category:gene == Gene SJ06408 == * transcription-direction: ** negative * right-end-position: ** 440106 * left-end-position: ** 425895 * centisome-position: ** 89.4775...")
(Created page with "Category:gene == Gene SJ19609 == * transcription-direction: ** positive * right-end-position: ** 15663 * left-end-position: ** 8253 * centisome-position: ** 3.680612 =...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06408 ==
+
== Gene SJ19609 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 440106
+
** 15663
 
* left-end-position:
 
* left-end-position:
−
** 425895
+
** 8253
 
* centisome-position:
 
* centisome-position:
−
** 89.4775    
+
** 3.680612    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[AIRS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[FGFTh]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[FPGFTh]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GART-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLYRIBONUCSYN-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6277]]
+
* [[PWY-6545]]
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6121]]
+
* [[PWY-7210]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6122]]
+
* [[PWY-7198]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6613]]
+
* [[PWY-7184]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=440106}}
+
{{#set: right-end-position=15663}}
−
{{#set: left-end-position=425895}}
+
{{#set: left-end-position=8253}}
−
{{#set: centisome-position=89.4775   }}
+
{{#set: centisome-position=3.680612   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Revision as of 08:20, 15 March 2021

Gene SJ19609

  • transcription-direction:
    • positive
  • right-end-position:
    • 15663
  • left-end-position:
    • 8253
  • centisome-position:
    • 3.680612

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05045&oldid=121851"