Difference between revisions of "SJ05072"
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(Created page with "Category:gene == Gene SJ02316 == * transcription-direction: ** positive * right-end-position: ** 6793 * left-end-position: ** 5876 * centisome-position: ** 4.2478437 =...") |
(Created page with "Category:gene == Gene SJ15244 == * transcription-direction: ** negative * right-end-position: ** 92941 * left-end-position: ** 80476 * centisome-position: ** 26.819252...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ15244 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 92941 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 80476 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 26.819252 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.7.1.133-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[2.7.1.134-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[2.7.1.139-RXN]] |
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6362]] |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6554]] |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6365]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6366]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-4661]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=92941}} |
| + | {{#set: left-end-position=80476}} | ||
| + | {{#set: centisome-position=26.819252 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 08:18, 15 March 2021
Contents
Gene SJ15244
- transcription-direction:
- negative
- right-end-position:
- 92941
- left-end-position:
- 80476
- centisome-position:
- 26.819252
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.1.133-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.7.1.134-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.7.1.139-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6362
- 5 reactions found over 5 reactions in the full pathway
- PWY-6554
- 5 reactions found over 5 reactions in the full pathway
- PWY-6365
- 3 reactions found over 4 reactions in the full pathway
- PWY-6366
- 3 reactions found over 4 reactions in the full pathway
- PWY-4661
- 3 reactions found over 7 reactions in the full pathway
